Hi
Just want to let you know that the UPlink MAC what you are referring to is not VTEP's MAC or VMNIC's MAC it is a DLR PMAC DLR has 2 Mac address concepts one called as V-MAC and P-MAC if you see the below OUTPUT from my LAB you will find the difference.
[root@esx-01a:~] net-vdr -C -l default+edge-e9648c5f-0f85-4eb2-9a66-0fc60c81b9cc >>>>>>>>>>>>>>>>DLR instance
Host locale Id: 42009e92-b1a7-d729-d5bf-5fa6838a6c1f >>>>>>>>>>>>>>>>>>>>>>>>>>Locale ID
Connection Information:
-----------------------
DvsName VdrPort NumLifs VdrVmac
------- ------- ------- -------
Mgmt_Edge_VDS vdrPort 0 02:50:56:56:44:52 >>>>>>>>>>>>>>>>>This MAC remains the same in all the Host this is your Internal interface Gateway Mac address
Vdr Switch Port: 50331656
Teaming Policy: Default Teaming
Uplink : Uplink 1(50331650): 00:50:56:f6:ec:8e(Team member) >>>>>>>>>>>>>>This MAC remains Unique in all the Host this is an INNER Mac address technically like VM-MAC
Stats : Pkt Dropped Pkt Replaced Pkt Skipped
Input : 0 0 58525652
Output : 0 0 18949223
The PMAC you will not see it on VTEP vmkernel or VMNIC's associated with VTEP interface.
[root@esx-01a:~] esxcfg-vmknic -l
Interface Port Group/DVPort/Opaque Network IP Family IP Address Netmask Broadcast MAC Address MTU TSO MSS Enabled Type NetStack
vmk0 1 IPv4 192.168.110.51 255.255.255.0 192.168.110.255 00:50:56:03:29:00 1500 65535 true STATIC defaultTcpipStack
vmk1 8 IPv4 10.10.20.21 255.255.255.0 10.10.20.255 00:50:56:60:66:5c 1500 65535 true STATIC defaultTcpipStack
vmk2 16 IPv4 10.10.30.51 255.255.255.0 10.10.30.255 00:50:56:62:46:2d 1500 65535 true STATIC defaultTcpipStack
vmk3 67 IPv4 192.168.150.52 255.255.255.0 192.168.150.255 00:50:56:6f:35:29 1600 65535 true STATIC vxlan "VTEP MAC"
[root@esx-01a:~] esxcfg-nics -l
Name PCI Driver Link Speed Duplex MAC Address MTU Description
vmnic0 0000:02:00.0 e1000 Up 1000Mbps Full 00:50:56:03:29:00 1600 Intel Corporation 82545EM Gigabit Ethernet Controller (Copper)
vmnic1 0000:02:01.0 e1000 Up 1000Mbps Full 00:50:56:03:00:56 1500 Intel Corporation 82545EM Gigabit Ethernet Controller (Copper)
Hope this might help you to further narrow down the issue and resolve it.