Actually the only reason why I saw obsolete snapshot files so far, was because of manual modifications (e.g. reassigning the vmdk file to a VM using the GUI). Anyway, from what you describe, it really looks like these files are not used anymore. To be sure you should take a look at the latest vmware.log file in the VM's folder. If the files are not referenced, you may delete them. However, I recommend you create a sub-folder and move the file to it first, then - if the VM runs without issues - you can safely delete the file and the sub-folder.
André