Enabling Guest VLAN tagging is supported with VXLAN Overlays. The method to enable it is a REST API call and not VGT mode on the virtualwire Port-groups.
REST API call to do the same is documented in the API guide. An example is as follows:
PUT https://<nsxmgr-ip>/api/2.0/vdn/scopes/vdnscope-1/virtualwires
<virtualWireCreateSpec>
<name>LS_vlan_tagging</name>
<description>For guest VLAN tagging</description>
<tenantId>virtual wire tenant</tenantId>
<controlPlaneMode>UNICAST_MODE</controlPlaneMode>
<guestVlanAllowed>true</guestVlanAllowed>
</virtualWireCreateSpec>