David,
The purge job is a daily job. So the effects of a change to the retention setting in Data Manager GUI will be seen overnight.
Some of the CCR reports use Rollup data as it's source, and a few of the detailed reports use the RAW data.
The value Number_days_data_retained=90 affects the raw data. There are other values that affect the rollup data.
Could it be that the report you looked at was showing you Hourly or Daily datapoints on the CCR reports?
To check this you can export a view to CSV and then open it in EXCEL. If the data is hourly, or daily then these are rollup values.
Another option:
Drill into an individual host (scroll down) to check the CPU Busy charts to see the RAW data on that graph. It should not go back more than 90 days from today if the purge job is working.
David D.